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Job DescriptionP52643
Confidence99.93%DateThu Jan 5 12:05:56 GMT 2012
Rank52Aligned Residues228
% Identity15%Templatec3p2yA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QYDKKYLQQVNESFGFELEFFDF. . . . . . LLTEKTAK. . . . TANGCEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGF
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Template Sequence  ALVPKVVEKLSAR. GLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVKVNPPTSDEISQLKP. GSVLIGFLAPRT
Template Known Secondary structure  SS
T.T

TTTTGGGT

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Query Sequence  NNVDLDAAKELGLKVVRVPAYDPEAVAE. . HAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGF. TMYGKTAGVIGTGKIG
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Template Sequence  QPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGASLSTRFVPMLTTAAGTVKPASALVLGVGVAG
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TT
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SSGGGGGG

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Query Sequence  VAMLRILKGFGMRLLAFDPYPSAA. . ALELGVEYVD. . . . . . . . . . . . . LPTLFSESDVISLHCPL. TPENYHLLNEAAF
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Template Sequence  LQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGSEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAA
Template Known Secondary structure  T

SSGGGTT





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B
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Query Sequence  EQMKNGVMIVNTS. . RGALID
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Template Sequence  TGMQPGSVVVDLAGETGGNCE
Template Known Secondary structure  TS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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