Job Description P52643 Confidence 98.28% Date Thu Jan 5 12:05:56 GMT 2012 Rank 138 Aligned Residues 148 % Identity 18% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.																.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																					.											.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.											.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	.	.	.	D	L	P	T	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	D	V	I	S	L	H	C
Query Conservation																																					.											.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.											.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	T	T	P	E	A	S	D	V	F	I	I	A	V
Template Known Secondary structure										S	T	T											T	T								S										T	T			S	S			T	T											T	T	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		206	.	.	.	210	.	.	.	.	.	.											.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Query Sequence		P	L	T	P	E	N	Y	H	L	L	N	.	.	.	.	.	.	.	.	.	.	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	.	.	.	.	.	.	.	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F
Query Conservation													.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		P	T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y	L	V	H	C	P	E	R	V	L	P	G	.	.	.	.
Template Known Secondary structure					B		S	S	T	T			B													G	G	G			T	T							S				T	T					T							T	T	T			B	T	T	T	B											S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	I	L	E	E	L	V	H	N	N	R	I	I	.	.	.	.	.	G	G	V	T	K	A	C	I	E	A	G	K	R	V	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.									S					.	.	.	.	.			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
												157	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions