Job Description P52643 Confidence 98.77% Date Thu Jan 5 12:05:56 GMT 2012 Rank 94 Aligned Residues 153 % Identity 21% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.												.	.	.	.	.
Query SS confidence																																					.	.												.	.	.	.	.
Query Sequence		K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	.	A	A	L	E	L	G	V	E	Y	V	D	.	.	.	.	.	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E
Query Conservation																																					.	.												.	.	.	.	.
Alig confidence																																					.	.												.	.	.	.	.																	.
Template Conservation																																																																							.
Template Sequence		R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V	P	.	X	T	A	I	D	S	L	L	D	A
Template Known Secondary structure		S								S													T	T								S	S										T	T					S												T	T							S		.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	.	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q
Query Conservation																						.
Alig confidence		.	.																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	H	T	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	X	D	G	L	F	K	R	A	V	W	V	V	T	F	D	Q
Template Known Secondary structure		.	.						T	T								S		S										T	T		G	G	G	B						T	T						G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S	S	S	S	T	T								G	G
Template Predicted Secondary structure		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		297	.	.	300								.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		A	F	L	T	.	.	.	.	.	.	.	A	E	A	L	T	S	I	S	Q	T	T	L	Q
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	D	G	T	D	I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A
Template Known Secondary structure		G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions