Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 26 Aligned Residues 296 % Identity 17% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	.	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N	N
Query Conservation																							.
Alig confidence																							.													.	.	.	.	.	.	.													.	.	.	.								.	.
Template Conservation																																				.	.	.	.	.	.	.													.	.	.	.								.	.
Template Sequence		I	I	F	Y	H	P	T	F	N	A	A	W	W	V	N	A	L	E	K	A	L	P	H	A	R	V	R	E	W	K	V	G	D	N	.	.	.	.	.	.	.	N	P	A	D	Y	A	L	V	W	Q	P	P	.	.	.	.	V	E	X	L	A	G	R	.	.	R	L	K	A	V	F	V	L	G	A	G	V	D	A
Template Known Secondary structure							S	S	S														T	T								T	T			.	.	.	.	.	.	.	S			S					S	S			.	.	.	.					T	T		.	.			S					S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.													.	.	.	.								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	.	.	.	.	.	.	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																			.	.
Template Conservation																																																											.	.
Template Sequence		I	L	S	K	L	N	A	H	P	E	X	L	D	A	S	I	P	L	F	R	L	E	D	T	G	X	G	L	Q	X	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	Q	A	L	K	N	Q	A	L	W	.	.	K	P	L	P	E	Y	T	R	E	E	F	S	V	G	I	X	G	A	G	V	L
Template Known Secondary structure										T	T	S	S		T	T	S								T	T																		T	T									T	T	T			.	.								S	T	T									S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		G	A	K	V	A	E	S	L	Q	A	W	G	F	P	L	R	C	W	S	R	S	R	K	S	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q	T	R	V	L	I	N	L	L	P	N	T	A	Q	T	V	G	I	I	N	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A	R
Template Known Secondary structure											T	T	T								S	S					T	T						S	T	T	T							T		S										T	T	T	T	T		B	S						T	S		T	T							S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		G	V	H	V	Q	E	A	D	L	L	A	A	L	D	S	G	K	L	K	G	A	X	L	D	V	F	S	Q	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	E	S	P	L	W	R	H	P	R	V	A	X	T	P	H	I	A	A	V	T	R	P	.	.	A	E	A	I	D	Y	I	S	R	T
Template Known Secondary structure		G	G	G	B												T	S							S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		T	T	T	T		T	T					S	S		S						.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.														.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	L	E	K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	Q	L	E	K	G	E	P	V	T	G	Q	V
Template Known Secondary structure							T	T				S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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