Job Description P52643 Confidence 96.97% Date Thu Jan 5 12:05:56 GMT 2012 Rank 286 Aligned Residues 101 % Identity 14% Template c3k8zD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		G	I	D	I	K	G	A	R	V	V	V	Q	G	F	G	N	A	G	S	Y	L	A	K	F	M	H	D	A	G	A	K	V	V	G	I	S	D	A	Y	G	G	L	Y	D	P	E	G	L	D	I	.	.	.	.	.	.	.	.	D	C	D	I	L	V	P	A	A	.	.	.	.	.	I	E	N	Q	I	T	E	E
Template Known Secondary structure		T			G	G	G									S	S												T	T									S	S						T	T					.	.	.	.	.	.	.	.									S	.	.	.	.	.		S		S	B		T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L
Query Conservation
Alig confidence								.																		.	.
Template Conservation								.																		.	.
Template Sequence		N	A	H	N	I	R	.	A	K	I	V	V	E	A	A	N	G	P	T	T	L	E	G	T	.	.	K	I	L	S	D	R	D	I	L	L	V
Template Known Secondary structure		T	G	G	G			.		S						S	S	S		B						.	.						T	T
Template Predicted Secondary structure								.																		.	.
Template SS confidence
		311	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions