Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 8 Aligned Residues 309 % Identity 22% Template c3k5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	.	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F
Query Conservation																								.
Alig confidence							.	.																.																																												.	.
Template Conservation							.	.																																																												.	.
Template Sequence		I	N	V	L	L	.	.	L	E	G	I	S	Q	T	A	V	E	Y	F	K	S	S	G	Y	T	N	V	T	H	L	P	K	A	L	D	K	A	D	L	I	K	A	I	S	S	A	H	I	I	G	I	R	S	R	T	Q	L	T	E	E	I	F	A	A	A	N	.	.	R	L	I	A	V	G	C	F	S	V	G	T
Template Known Secondary structure		S					.	.		S													T	T								S	S												T	T		S						S	S			B									T	.	.	T								S	S
Template Predicted Secondary structure							.	.																																																												.	.
Template SS confidence
		12	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	V	E	L	K	A	A	R	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	I	I	M	L	M	R	R	I	F	P	R	S	V	S	A	H	A	G	G	W	E	K	T	A	I	G	S	R	E	V	R	G	K	T	L	G	I	V	G	Y	G	N	I	G	S	Q	V
Template Known Secondary structure		T	T	B								T	T							S	S	T	T																	T	T										T	T							T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D
Query Conservation
Alig confidence																										.																							.	.	.	.	.
Template Conservation																										.																							.	.	.	.	.
Template Sequence		G	N	L	A	E	S	L	G	M	T	V	R	Y	Y	D	T	S	D	K	L	Q	Y	G	N	.	V	K	P	A	A	S	L	D	E	L	L	K	T	S	D	V	V	S	L	H	V	P	.	.	.	.	.	S	K	L	I	T	E	A	K	L	R	K	M	K	K	G	A	F	L	I	N	N	A	R	G	S	D	V	D
Template Known Secondary structure								T	T								T	T					B	T	T	.	B				S	S									S								.	.	.	.	.				B								S		T	T							S		T	T	S	B
Template Predicted Secondary structure																										.																							.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	L	A	K	V	L	Q	E	G	H	L	A	G	A	A	I	D	V	F	P	V	E	P	A	S	N	G	E	.	.	.	.	.	.	.	.	.	R	F	S	T	P	L	Q	G	L	E	N	V	I	L	T	P	H	I	G	G	S	T	E	E	A	Q	E	R	I	G	T	E	V	T	R	K	L	V	E	Y	S
Template Known Secondary structure											T	T	S										S	S			S	S	T	T	S	.	.	.	.	.	.	.	.	.					T	T	T	T		T	T						S		T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	G	S	T	V	G	A	V
Template Known Secondary structure							T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions