Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 24 Aligned Residues 305 % Identity 20% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N	N
Query Conservation
Alig confidence																																																				.	.													.	.														.
Template Conservation																																																				.	.													.	.														.
Template Sequence		Q	R	T	L	L	L	L	S	Q	D	N	A	H	Y	E	R	L	L	K	A	A	H	L	P	H	L	R	I	L	R	A	D	N	Q	S	D	A	E	K	L	I	G	E	A	H	I	L	M	A	E	.	.	P	A	R	A	K	P	L	L	A	K	A	N	.	.	K	L	S	W	F	Q	S	T	Y	A	G	V	D	.
Template Known Secondary structure									S	T	T											S			T	T							S	S								G	G	G		S						.	.					G	G	G	G	G	G		T	.	.	T							S	S	S			G	.
Template Predicted Secondary structure																																																				.	.													.	.														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		V	L	L	D	A	R	C	R	R	D	Y	Q	L	T	N	V	R	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	.	.	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I	A	H
Template Known Secondary structure		G	G	S		T	T	S			S	S							S																			T	T										T	T			.	.								S	T	T									S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		T	G	K	H	F	G	M	K	V	L	G	V	S	R	S	G	R	E	R	A	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	I	L	F	N	V	G	R	G	N	A	I	N	E
Template Known Secondary structure						T	T								S	S					T	T		S					G	G	G							T		S										S	S	S	T	T	S	B		T	T	T	T	T		S		T	T							S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		G	D	L	L	T	A	L	R	T	G	K	L	G	M	A	V	L	D	V	F	E	Q	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	D	S	P	L	W	G	Q	P	N	L	I	I	T	P	H	N	S	A	Y	S	F	P	.	.	D	D	V	A	Q	I	F	V	R	N	Y	I	R	F	I	D
Template Known Secondary structure										T	T	S	S	S					S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		T	T	T	T		T	T						S		S	S					.	.																T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.														.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		321	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	P	L	D	G	K	I
Template Known Secondary structure		T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions