Return to main results Retrieve Phyre Job Id

Job DescriptionP52643
Confidence98.06%DateThu Jan 5 12:05:56 GMT 2012
Rank153Aligned Residues83
% Identity19%Templatec3hdjA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:probable ornithine cyclodeaminase; PDBTitle: the crystal structure of probable ornithine cyclodeaminase from2 bordetella pertussis tohama i
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160........ .170.........180.. .......190.........200.........210.....
Predicted Secondary structure 







..




.......















Query SS confidence 























. .













. . . . . . .
































Query Sequence  KTAGVIGTGKIGVAMLRILKGFGM. . RLLAFDPYPSAAAL. . . . . . . ELGVEYVDLPTLFSESDVISLHCPLTPENYHLL
Query Conservation    




 
 

  

  
  

 .. 
            .......        
 


  



 
  


  
  

Alig confidence 























..













.......





















...







Template Conservation    






 

   
 

  
  
  
 
  
      
                 

   




 
...
 
  
  
Template Sequence  SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARXAAPADIAAQADIVVTA. . . TRSTTPLF
Template Known Secondary structure 


SS



TT

TS



S
...


SS
SS
Template Predicted Secondary structure 




















...





Template SS confidence 















































































   119120.........130.........140.........150.........160.........170.........180....... ..190.....
 
   216...220.........230...
Predicted Secondary structure 






Query SS confidence 

















Query Sequence  NEAAFEQMKNGVMIVNTS
Query Conservation      
  

 

 


  
Alig confidence 



...










Template Conservation      ...
  
 

  

Template Sequence  AGQA. . . LRAGAFVGAIG
Template Known Secondary structure 
GGG...

TT


Template Predicted Secondary structure 
...





Template SS confidence 

















   196... 200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions