Job Description P52643 Confidence 99.97% Date Thu Jan 5 12:05:56 GMT 2012 Rank 42 Aligned Residues 292 % Identity 16% Template c3gvpB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:adenosylhomocysteinase 3; PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3 Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																														.	.	.																														.	.	.	.	.	.
Query SS confidence																														.	.	.																														.	.	.	.	.	.
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	.	.	.	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	.	.	.	.	.	.	P	V	L	E	E	L	K	K	H	G	V	K	Y	I
Query Conservation																														.	.	.																														.	.	.	.	.	.
Alig confidence																														.	.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	G	C	T	H	I	T	A	Q	T	A	V	L	M	E	T	L	G	A	L	G	A	Q	C	R	W	A	A	C	N	I	Y	S	T	L	N	E	V	A	A	A	L	A	E	S	G	F	P	V	F	A	W	K	G	E	S	E	D	D	F	W	W	C	I	D	R	C	V	N	V	E	G	W	Q	P	N	M	I
Template Known Secondary structure										S													T	T								S	S	S	S													T	T							T	T																B	T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	C	A	G	F	N	N	V	D	L	D	A	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	D	D	G	G	D	L	T	H	W	I	Y	K	K	Y	P	N	M	F	K	K	I	K	G	I	V	E	E	S	V	T	G	V	H	R	L	Y	Q	L	A	G	K	L	C	V	P	A	M	N	V	N	D	S	V	T	K	Q	K	F	D	N	L	Y	C	C	R	E	S	I	L	D	G	L	.	.	.	.	.	.	.
Template Known Secondary structure				S	S	S																T		S																						S						T	T									T													.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	.	.	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.	.	.																																															.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	R	T	T	D	M	M	F	G	G	K	Q	V	V	V	C	G	Y	G	E	V	G	K	G	C	C	A	A	L	K	A	M	G	S	I	V	Y	V	T	E	I	D	P	I	C	A	L	Q	A	C	M	D	G	F	R	L	V	K	L	N	E	V	I	R	Q	V	D	I	V	I	T	C	T
Template Known Secondary structure		.	.	.	.	.	.	.									T	T									S													T	T								S	S										T	T										T	T	T		S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	.	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L
Query Conservation																																		.
Alig confidence			.	.	.	.																												.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	N	K	N	V	V	T	R	E	H	L	D	R	M	K	N	S	C	I	V	C	N	M	G	H	S	N	T	E	I	D	V	A	S	L	R	T	P	E	L	T	W	E	R	V	R	S	Q	V	D	H	V	I	W	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	I	V	L
Template Known Secondary structure		S	.	.	.	.		S	S	S	B								S		T	T							S	S	T	T	T	T	B	T	G	G	G	G		S	T	T								T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure			.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		456					.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.															.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	.	.	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K	G	E	T	C	P	N	E	L
Query Conservation																		.	.
Alig confidence									.	.	.							.	.
Template Conservation									.	.	.
Template Sequence		L	A	E	G	R	L	L	.	.	.	N	L	S	C	S	T	V	P	T	F	V	L	S	I	T	A	T	T	Q	A	L	A	L	I	E	L	Y	N	A	P	E	G	R	Y	K	Q
Template Known Secondary structure			G	G	G	S	B		.	.	.																												T			T	T	S	S		S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		518	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions