Job Description P52643 Confidence 96.48% Date Thu Jan 5 12:05:56 GMT 2012 Rank 352 Aligned Residues 87 % Identity 15% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.											.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.													.
Query Sequence		T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	.	.	.	.	.	.	.	.	.	.	E	L	G	V	E	Y	V	D	L	P	T	L	.	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P
Query Conservation																																												.	.	.	.	.	.	.	.	.	.													.
Alig confidence						.																																						.	.	.	.	.	.	.	.	.	.													.
Template Conservation						.
Template Sequence		D	I	C	N	.	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y
Template Known Secondary structure					S	.								S													T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure						.
Template SS confidence
		415	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		E	A	.	.	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I
Template Known Secondary structure				.	.												S	S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		494	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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