|   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Y | G | K | T | A | G | V | I | G | T | G | K | I | G | V | A | M | L | . |
. |
. |
. |
. |
R | I | L | K | G | F | G | M | R | L | L | A | F | D | P | Y | P | S | A | A | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | G | V | E | Y | V | D | L | P | T | L | F | S | E | S | D | V | I | S | L | H |
Query Conservation |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
| . | . | . | . | . |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
Template Sequence |   |
L | D | Q | I | K | I | A | Y | I | G | G | G | S | Q | G | W | A | R | S | L | X | S | D | L | S | I | D | E | R | X | S | G | T | V | A | L | Y | D | L | D | F | E | A | A | Q | K | N | E | V | I | G | N | H | S | G | N | G | R | W | R | Y | E | A | V | S | T | L | K | K | A | L | S | A | A | D | I | V | I | I | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  | T | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S | S |  |  |  |  |  |  | S | S |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
205 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | P | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | N | Y | H | L | L | N | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | F | E | Q | M | K | N | G | V | M | I | V | N | T | S | R | G | A | L | I | D | S | Q | A | A | I | E | A | L | K | N |
Query Conservation |   |
  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |
|   |   |   |   |
Template Sequence |   |
I | L | P | G | S | L | D | D | X | E | V | D | V | H | L | P | E | R | C | G | I | Y | Q | S | V | G | D | T | V | G | P | G | G | I | I | R | G | L | R | A | V | P | I | F | A | E | I | A | R | A | I | R | D | Y | A | P | E | S | W | V | I | N | Y | T | N | P | X | S | V | C | T | R | V | L | Y | K | V | F | P | G |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |  |  |  |  | G | G | G | G | G | T |
|
|
| S | S |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
250 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
Q | K | I | G | S |
Query Conservation |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
Template Sequence |   |
I | K | A | I | G |
Template Known Secondary structure |   |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
167 | . | . | 170 | . |
  |