Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 23 Aligned Residues 306 % Identity 22% Template c3evtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from2 lactobacillus plantarum Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N	N	V	D
Query Conservation
Alig confidence																																										.	.	.	.																			.	.
Template Conservation																																										.	.	.	.																			.	.
Template Sequence		L	V	L	M	A	Q	A	T	K	P	E	Q	L	Q	Q	L	Q	T	T	Y	P	D	W	T	F	K	D	A	A	A	V	T	A	A	D	Y	D	Q	I	E	.	.	.	.	V	M	Y	G	N	H	P	L	L	K	T	I	L	A	R	P	T	N	.	.	Q	L	K	F	V	Q	V	I	S	A	G	V	D	Y	L	P
Template Known Secondary structure							S															T	T						T	T	S			T	T	T	G	G	G			.	.	.	.				S			T								S	T	T		.	.								S	S	S			T	T	S
Template Predicted Secondary structure																																										.	.	.	.																			.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	L	Q	A	A	G	V	V	V	A	N	T	S	G	I	H	A	D	A	I	S	E	S	V	L	A	A	M	L	S	V	V	R	G	Y	H	A	A	W	L	N	Q	R	G	A	R	Q	W	A	L	P	M	T	T	S	T	L	T	G	Q	Q	L	L	I	Y	G	T	G	Q	I	G	Q	S	L	A	A	K	A
Template Known Secondary structure								T	T							T	T																			T	T									T	T	T			S	S		S	S					S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		S	A	L	G	M	H	V	I	G	V	N	T	T	G	H	P	A	D	H	F	H	E	T	V	A	F	T	A	T	A	D	A	L	A	T	A	N	F	I	V	N	A	L	P	L	T	P	T	T	H	H	L	F	S	T	E	L	F	Q	Q	T	K	Q	Q	P	M	L	I	N	I	G	R	G	P	A	V	D	T	T	A
Template Known Secondary structure				T	T								S	S					T	T		S					G	G	G									S										G	G	G	T	T		B	S						T			S								S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K	G	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	T	A	L	D	H	H	Q	L	S	M	A	A	L	D	V	T	E	P	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	T	D	H	P	L	W	Q	R	D	D	V	L	I	T	P	H	I	S	G	Q	I	A	H	F	R	A	T	V	F	P	I	F	A	A	N	F	A	Q	F	V	K	D	G
Template Known Secondary structure								T	T	S		S					S	S		S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		G	G	G	G		S	S						S		T	T																								S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.														.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		323	.	.		.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		T	C	P	.	N	E	L
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		T	L	V	R	N	Q	V
Template Known Secondary structure					S		B
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions