|   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | F | T | M | Y | G | K | T | A | G | V | I | G | T | G | K | I | G | V | A | M | L | R | I | L | K | G | F | G | M | R | L | L | A | F | D | P | Y | P | S | A | A | . |
. |
A | L | E | L | G | V | E | Y | V | D | L | P | T | L | F | S | E | S | D | V | I | S | L | H | C | P | L | T | P | E | N | Y | H | L | L |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|
| . | . | . | . |   |   |   |
|
|
Template Sequence |   |
T | D | A | L | I | G | G | K | K | V | L | I | C | G | Y | G | D | V | G | K | G | C | A | E | A | M | K | G | Q | G | A | R | V | S | V | T | E | I | D | P | I | N | A | L | Q | A | M | M | E | G | F | D | V | V | T | V | E | E | A | I | G | D | A | D | I | V | V | T | A | T | G | . |
. |
. |
. |
N | K | D | I | I |
Template Known Secondary structure |   |
|
|
|
|
| T | T | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |
|
|  |  |  |  | G | G | G |
| S |  |  |  |  |
| S | S | . | . | . | . |
| S |
| S | B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | |
|
|
|
340 | . | . | . | . |
  |
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | A | A | F | E | Q | M | K | N | G | V | M | I | V | N | T | S | R | G | A | L | . |
I | D | S | Q | A | A | I | E | A | L | K | N | Q | K | I | G | S | L | G | M | D | V | Y | E | N | E | R | D | L | F | F | E | D | K | S | N | D | V | I | Q | D | D | V | F | R | R | L | S | A | C | H | N | V | L | F | T | G |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|   |
| . |
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |
|
|
|   |
|   |   |
|
|
|   |   |
Template Sequence |   |
M | L | E | H | I | K | A | M | K | D | H | A | I | L | G | N | I | G | H | F | D | N | E | I | D | M | A | G | L | E | R | S | G | A | T | R | V | N | V | K | P | Q | V | D | L | W | T | F | G | D | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | S | I | I | V | L | S | E | G | R | L | L | N | L | G | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |
| S | S | T | T | T | T | B | T |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |
| T | T | T | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  | G | G | G | S | B |  |  |  |  | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
  |
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | A | F | L | T | A | E | A | L | T | S | I | S | Q | T | T | L | Q | N | L | S | N | L | E | K | G | E | T | C | P | N | E | L |
Query Conservation |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
A | T | G | H | P | S | F | V | M | S | N | S | F | A | N | Q | T | I | A | Q | I | E | L | W | T | K | N | D | E | Y | D | N | E | V |
Template Known Secondary structure |   |
S |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|
| S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
413 | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . |
  |