Job Description P52643 Confidence 95.56% Date Thu Jan 5 12:05:56 GMT 2012 Rank 432 Aligned Residues 193 % Identity 22% Template c3d8tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	.	.	.	.	.	.	.	.	.	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																									.	.	.	.	.	.	.	.	.																										.
Template Conservation							.	.																																																											.
Template Sequence		M	R	I	A	Y	.	.	A	G	L	R	R	K	E	E	F	K	A	L	A	E	K	L	G	F	T	P	L	L	F	P	V	Q	A	T	E	K	V	P	V	P	E	Y	R	D	Q	V	R	E	L	A	Q	G	V	D	L	F	L	A	T	T	G	V	G	V	.	R	D	L	L	E	A	G	K	A	L	G	L	D	L
Template Known Secondary structure							.	.			S	S												T	T									B				S				T	T									T	T			S											.										T	T
Template Predicted Secondary structure							.	.																																																											.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.
										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	A	L	R	C	A	G	F	N	N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	P	L	A	K	A	F	R	L	A	R	G	A	K	A	.	.	.	.	A	R	A	L	K	E	A	G	L	P	P	H	A	V	G	D	G	T	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	P	L	L	P	Q	G
Template Known Secondary structure							T	S					S	S				.	.	.	.							T	T				S				S	S	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G
Template Predicted Secondary structure																		.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																																.	.	.	.	.	.	120	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	.	.	.	.	.	N	E	A
Query Conservation																																																																										.	.	.	.	.
Alig confidence																																											.	.	.																													.	.	.	.	.
Template Conservation																																											.	.	.
Template Sequence		R	G	V	A	A	L	Q	L	Y	G	K	P	L	P	L	L	E	N	A	L	A	E	R	G	Y	R	V	L	P	L	M	P	Y	R	H	L	P	D	P	E	G	.	.	.	I	L	R	L	E	E	A	V	L	R	G	E	V	D	A	L	A	F	V	A	A	I	Q	V	E	F	L	F	E	G	A	K	D	P	K	A
Template Known Secondary structure			S							S	S	S												T	T								S					B					.	.	.										T	T			S						S												S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	A	L	N	T	R	V	K	A	L	A	V	G	R
Template Known Secondary structure							T	T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions