Job Description P52643 Confidence 99.91% Date Thu Jan 5 12:05:56 GMT 2012 Rank 54 Aligned Residues 281 % Identity 19% Template c3d64A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																															.	.	.																																									.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																									.	.	.	.	.	.	.	.
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	.	.	.	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.																																									.	.	.	.	.	.	.	.
Alig confidence																															.	.	.																																					.				.	.	.	.	.	.	.	.
Template Conservation																																																																						.
Template Sequence		R	I	A	G	S	L	H	M	T	I	Q	T	G	V	L	I	E	T	L	K	A	L	G	A	D	V	R	W	A	S	C	N	I	F	S	T	Q	D	H	A	A	A	A	I	V	E	A	G	T	P	V	F	A	F	K	G	E	S	L	D	E	Y	W	E	F	S	H	R	.	I	F	E	W	P	N	G	E	F	A	N
Template Known Secondary structure							S			S													T	T								S	S	S	S													T	T							T	T													.	T	T			S	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.
																																																															71	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	A	L	R	C	A	G	F	N	N	V	.	D	L	D	A	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		M	I	L	D	D	G	G	D	A	T	L	L	L	I	L	G	S	K	A	E	K	D	R	S	V	I	A	R	P	T	N	E	E	E	V	A	L	F	K	S	I	E	R	H	L	E	I	D	G	S	W	Y	S	K	R	L	A	H	I	K	G	V	T	E	E	T	T	T	G	V	H	R	L	Y	Q	M	E	K	D	G
Template Known Secondary structure						S	S	S																G	G	G	G	T				S															T	T		T	T	T	T					T	T								S													T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	P	F	P	A	F	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	S	L	V	D	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	A	T	D	V	M	I	A	G	K	I	A	V	V	A	G	Y	G	D	V	G	K	G	C	A	Q	S	L	R	G	L	G	A
Template Known Secondary structure					S						T	T	S														T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T									S												T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.															.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		169	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		R	L	L	A	F	.	.	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A
Query Conservation							.	.
Alig confidence							.	.																																	.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		T	V	W	V	T	E	I	D	P	I	C	A	L	Q	A	A	M	E	G	Y	R	V	V	T	M	E	Y	A	A	D	K	A	D	I	F	V	T	A	T	.	.	.	.	G	N	Y	H	V	I	N	H	D	H	M	K	A	M	R	H	N	A	I	V	C	N	I	G	H	F	D	S	E	I	D	V	A	S	T	R	Q
Template Known Secondary structure								S										T	T	T										T	T	T		S						S	.	.	.	.	S	S	S		S	B										T	T							S	S	S	S		S	B			G	G	G	T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E
Query Conservation
Alig confidence								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		Y	Q	W	E	N	I	.	K	P	Q	V	D	H	I	I	F	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	V	I	L	L	A	E	G	R	L	V	.	.	.	N	L	G	C	A	T	G	H	P	S	F	V	M	S	N	S	F	T	N	Q	T	L	A	Q	I
Template Known Secondary structure		S						.		T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							G	G	G	S	B		.	.	.				T	S			S
Template Predicted Secondary structure								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		357	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.															.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions