Job Description P52643 Confidence 98.95% Date Thu Jan 5 12:05:56 GMT 2012 Rank 82 Aligned Residues 154 % Identity 19% Template c3b1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																												.	.												.	.								.	.	.
Query SS confidence																												.	.												.	.								.	.	.
Query Sequence		Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	.	R	L	L	A	F	D	P	Y	P	S	A	.	.	A	A	L	E	L	G	V	.	.	.	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L
Query Conservation																												.	.												.	.								.	.	.
Alig confidence																												.	.												.	.								.	.	.																					.
Template Conservation																																																																									.
Template Sequence		E	E	K	T	I	Y	I	A	G	L	G	L	I	G	A	S	L	A	L	G	I	K	R	D	H	P	H	Y	K	I	V	G	Y	N	R	S	D	R	S	R	D	I	A	L	E	R	G	I	V	D	E	A	T	A	D	F	K	V	F	A	A	L	A	D	V	I	I	L	A	V	P	.	I	K	K	T	I	D	F	I
Template Known Secondary structure												S															T	T	S							S	S										T	T	S		S				S		T	T	T	T	G	G	G		S						S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	A	D	L	D	L	K	E	D	V	I	I	T	D	A	G	S	T	K	Y	E	I	V	R	A	A	E	Y	Y	L	K	D	K	P	V	Q	F	V	G	S	H	P	X	A	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	A	N	V	N	L	F	E	N	A	Y	Y	I	F	S	P	S
Template Known Secondary structure						T	S				T	T								S														T	T	S	S										.			T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			T	T	T	T	T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.														130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		C	L	T	.	K	P	N	T	I	P	A	L	Q	D	L	L
Template Known Secondary structure		T	T		.		T	T									T
Template Predicted Secondary structure					.
Template SS confidence
		152	.	.		.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions