Job Description P52643 Confidence 97.65% Date Thu Jan 5 12:05:56 GMT 2012 Rank 183 Aligned Residues 157 % Identity 14% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	P	K	A	E	P	L	P	A	A	D	F	W	G	L
Template Known Secondary structure		T			S	T	T									S													T	T									S	S						T	T														T	S	S	S	T	T		T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
			198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I
Query Conservation		.
Alig confidence		.								.	.	.	.	.																		.																.	.										.													.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																		.																.	.										.													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	E	F	L	V	P	A	.	.	.	.	.	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	R	A	R	.	I	V	A	E	G	A	N	G	P	T	T	P	A	A	D	.	.	D	I	L	L	E	K	G	V	L	.	V	V	P	D	V	I	A	N	A	G	G	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S						.	.	.	.	.	S	S	S	S		B		T	T	T	G	G	G				S	.						S	S	S		B						.	.							T			.								T	T				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.																		.																.	.										.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K
Query Conservation
Alig confidence		.											.	.	.	.	.
Template Conservation		.											.	.	.	.	.
Template Sequence		.	T	V	S	Y	F	E	W	V	Q	D	.	.	.	.	.	F	N	S	Y	F	W	T	E	E	E	I	N	A	R	L	E	R	V	L	R	N	A	F	E	A	V	W	Q
Template Known Secondary structure		.											.	.	.	.	.	T	T	T
Template Predicted Secondary structure		.											.	.	.	.	.
Template SS confidence
			355	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions