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Job DescriptionP52643
Confidence99.96%DateThu Jan 5 12:05:56 GMT 2012
Rank45Aligned Residues271
% Identity14%Templatec2vhyB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:alanine dehydrogenase; PDBTitle: crystal structure of apo l-alanine dehydrogenase from2 mycobacterium tuberculosis
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKLAVYSTKQYD. . . . . . . KKYLQQVNESFGFELEFFDFLLT. . . . . . . . . . . . . . . . . EKTAKTANGCEAVCIFVNDDG
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Template Sequence  MRVGIPTETKNNEFRVAITPAGVAELTRR. GHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADAD. LLLKVKEPI
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Query Sequence  SRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEG
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Template Sequence  AAEYGRLRH. . GQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQGGR
Template Known Secondary structure  GGGGGG

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Query Sequence  . . . . LTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAAL. . . . . . . . . . ELGVEYVDLPTLFSESDVIS
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Template Sequence  GVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVI
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Query Sequence  LHCPLTPENYHLLNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKN. . . . . . . . . QKIGSLGMDVYENERDLFFEDKSN
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Template Sequence  GAVLV. . . . . . . . . . . . VAHMKPGAVLVDITLFYCMPASVPKTSTYALTNATMPYVLELADHGWRAACRSN. . . . . . . . .
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Query Sequence  DVIQDDVFRRLSACHNVLFTGHQAFLT
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Template Sequence  . . . . PALAKGLSTHEGALLSERVATDL
Template Known Secondary structure  ....TTTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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