Job Description P52643 Confidence 98.73% Date Thu Jan 5 12:05:56 GMT 2012 Rank 101 Aligned Residues 125 % Identity 14% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.
Predicted Secondary structure																																										.	.											.																								.	.
Query SS confidence																																										.	.											.																								.	.
Query Sequence		F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	.	A	A	L	E	L	G	V	E	Y	V	.	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	.	.	H	L
Query Conservation																																										.	.											.																								.	.
Alig confidence																																										.	.											.																								.	.
Template Conservation
Template Sequence		I	T	P	T	D	K	K	I	G	F	L	G	L	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K	A	A	K	D	L	V	L
Template Known Secondary structure						S	S								S													T	T								S	S	G	G	G	G						T	T					S										S							S	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	S	G	V	L	Q	G	I	R	P	G	K	C	Y	V	D	M	S	T	V	D	A	D	T	V	T	E	L	A	Q	V	I	V	S	R	G	G	R	F	L	E	A	P	V	S	G	N	Q	Q
Template Known Secondary structure		S	T	T		G	G	G	G			T	T							S																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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