Job Description P52643 Confidence 96.67% Date Thu Jan 5 12:05:56 GMT 2012
Rank 331 Aligned Residues 91
% Identity 18% Template c2ph5A_
PDB info
PDB header: transferaseChain: A: PDB Molecule: homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
137 . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
L T G F T M Y G K T A G V I G T G K I G V A M L R I L .
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K G F G M R L L A F D P Y P S A A A L E L G V E Y .
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V D L P T L F S .
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E S D
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                               
Template Sequence  
N T K K I L F K N R F V I L G F G C V G Q A L X P L I F E K F D I K P S Q V T I I A A E G T K V D V A Q Q Y G V S F K L Q Q I T P Q N Y L E V I G S T L E E N D
Template Known Secondary structure  
T T B S S B G G G S S S T T T T T G G G T T
Template Predicted Secondary structure  
Template SS confidence  
   
6 . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . .
 
   
200 . . . . . . . . . 210 . . . . . . . . . 220 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V I S L H C P L T P E N Y H L L N E A A F E .
Q M K N G V M I V N T S
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
F L I D V S I G I .
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S S L A L I I L C N Q K G A L Y I N A A
Template Known Secondary structure  
S S S . . . . . . T S S
Template Predicted Secondary structure  
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Template SS confidence  
   
86 . . . 90 . . . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]