Job Description P52643 Confidence 97.11% Date Thu Jan 5 12:05:56 GMT 2012 Rank 261 Aligned Residues 140 % Identity 16% Template c2otcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine transcarbamoylase complexed with n-2 (phosphonacetyl)-l-ornithine Resolution 2.80 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.		.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																																					.		.
Query SS confidence																																																																					.		.
Query Sequence		D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	.	T	.	G	K	I	G	V	A	M	L	R	I
Query Conservation																																																																					.		.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.		.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	A	E	Y	A	R	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A
Template Known Secondary structure									S								S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T			G	G	G							S		T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.														.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V
Template Known Secondary structure															G	G	G																	T	T							S							T	T		S							S	S		T	T	S		T	T										G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		216	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.																						.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	A	A	F	E	Q	M	.	K	N	G	V	M	I	V	N	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	A	L	I	D	S	Q	A	A
Query Conservation										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F
Template Known Secondary structure								T	T			T	T							S					S	T	T	S										T			T	T	B	S	S	B	B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions