Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 20 Aligned Residues 311 % Identity 28% Template c2omeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:c-terminal-binding protein 2; PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	.	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N
Query Conservation																																													.
Alig confidence																									.																				.																						.	.
Template Conservation																									.																																										.	.
Template Sequence		R	P	L	V	A	L	L	D	G	R	D	C	T	V	E	M	P	I	L	K	D	L	A	.	T	V	A	F	C	D	A	Q	S	T	Q	E	I	H	E	K	V	L	N	E	A	V	G	A	M	M	Y	H	T	I	T	L	T	R	E	D	L	E	K	F	K	.	.	A	L	R	V	I	V	R	I	G	S	G	Y	D
Template Known Secondary structure								T	T		S			T	T						T	T	T		.								S	S	G	G	G	S															S	S	S		B							T		S	.	.	S							S	S	S			T
Template Predicted Secondary structure																									.																																										.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	.	.	.	.	.	.	.	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	D	I	K	A	A	G	E	L	G	I	A	V	C	N	I	P	S	A	A	V	E	E	T	A	D	S	T	I	C	H	I	L	N	L	Y	R	R	N	T	W	L	Y	Q	A	L	R	E	G	T	R	V	Q	S	V	E	Q	I	R	E	V	A	S	G	A	A	R	I	R	G	E	T	L	G	L	I	G	F	G
Template Known Secondary structure		T	B								T	T								S	S	S																												T	T					S								T	T	T					T	T									S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.										.
Query SS confidence																													.										.
Query Sequence		K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	.	A	L	E	L	G	V	E	Y	V	.	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N
Query Conservation																													.										.
Alig confidence																													.										.
Template Conservation
Template Sequence		R	T	G	Q	A	V	A	V	R	A	K	A	F	G	F	S	V	I	F	Y	D	P	Y	L	Q	D	G	I	E	R	S	L	G	V	Q	R	V	Y	T	L	Q	D	L	L	Y	Q	S	D	C	V	S	L	H	C	N	L	N	E	H	N	H	H	L	I	N	D	F	T	I	K	Q	M	R	Q	G	A	F	L	V	N
Template Known Secondary structure												G	G	G	T								T	T	S		T	T					T	T					S	S									S										T	T		T	T	S	B						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	.	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T
Query Conservation																																																		.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	R	G	G	L	V	D	E	K	A	L	A	Q	A	L	K	E	G	R	I	R	G	A	A	L	D	V	H	E	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	F	A	Q	G	P	L	K	D	A	P	N	L	I	C	T	P	H	T	A	W	Y	S	E	Q	A	S	L	E	M	R	E	A
Template Known Secondary structure			S		G	G	G	B											T	T	S							S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S	T	T	T	T		S	S					S	S		T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.														.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	N	L	S	N	L	E	K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	E	I	R	R	A	I	T	G	R	I	P	E	S	L	R
Template Known Secondary structure												S		T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions