Job Description P52643 Confidence 95.50% Date Thu Jan 5 12:05:56 GMT 2012 Rank 436 Aligned Residues 131 % Identity 18% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.
Predicted Secondary structure																																									.	.	.																.	.																.	.	.
Query SS confidence																																									.	.	.																.	.																.	.	.
Query Sequence		M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	.	.	.	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	.	.	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	.	.	.	N	Y	H
Query Conservation																																									.	.	.																.	.																.	.	.
Alig confidence																												.													.	.	.																.	.																.	.	.
Template Conservation																												.
Template Sequence		E	D	G	L	T	V	V	V	I	G	A	G	G	A	G	K	A	L	A	Y	G	A	K	E	K	A	.	K	V	V	I	A	N	R	T	Y	E	R	A	L	E	L	A	E	A	I	G	G	K	A	L	S	L	T	D	L	D	N	Y	E	D	G	M	V	L	A	N	T	T	S	M	G	M	Q	P	N	V	E	E	T
Template Known Secondary structure													S												T			.							S	S									T	T	T	T						G	G	G	T	T					S							S	S	T	T		T	T		T	T
Template Predicted Secondary structure																												.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		P	I	S	K	D	A	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	A	L	V	F	D	A	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	R	I	T	R	L	L	R	.	.	.	.	.	E	A
Template Known Secondary structure		S	S		G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S						.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		533	.	.	.	.	.	.	540																															.	.	.	.	.	.	.	.	.	550																	.	.	.	.	.	.	.	.	.						560	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K	G	E	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	S	G	A	I	T	V	S	G	S	E	M	F	V	R	Q	A	Y	E	Q	F	E	I	F	T	G	L	P	A	P
Template Known Secondary structure			T	T	T																								S
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions