Job Description P52643 Confidence 96.21% Date Thu Jan 5 12:05:56 GMT 2012 Rank 379 Aligned Residues 93 % Identity 17% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.														.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	.	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C
Query Conservation																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	R	C	K	I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	N	V	S	A	N	S	K	L	V	I	I	T	A
Template Known Secondary structure														S												T	T	T	S		S							S															T	T	T	T		S								S	S	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
					206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	.	.	.	.	.	.	.	.	.	.	K	N	G	V	M	I	V	N	T	S
Query Conservation		.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	R	M	V	S	G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	N	S	P	D	C	K	I	I	V	V	T
Template Known Secondary structure		S					T	T	T		S	S		T	T											T	T	T					S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions