Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 21 Aligned Residues 313 % Identity 21% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																						.	.
Query SS confidence																																		.																						.	.
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	.	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	.	.	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A
Query Conservation																																		.																						.	.
Alig confidence													.																					.																						.	.													.	.
Template Conservation													.																																																									.	.
Template Sequence		D	E	E	K	L	Y	G	C	T	E	N	.	K	L	G	I	A	N	W	L	K	D	Q	G	H	E	L	I	T	T	S	D	K	E	G	N	S	V	L	D	Q	H	I	P	D	A	D	I	I	I	T	T	P	F	H	P	A	Y	I	T	K	E	R	I	D	K	A	K	.	.	K	L	K	L	V	V	V	A	G	V
Template Known Secondary structure		T		T	T		T	T	B	T	T	T	.	G	G	G								T	T							S												G	G	G		S						T	T	S				B									T	.	.	T							S	S	S
Template Predicted Secondary structure													.																																																									.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																.	.																																														.	.
Query SS confidence																.	.																																														.	.
Query Sequence		G	F	N	N	V	D	L	D	A	A	K	E	L	G	.	.	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	.	.	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G
Query Conservation																.	.																																														.	.
Alig confidence																.	.																																														.	.
Template Conservation
Template Sequence		G	S	D	H	I	D	L	D	Y	I	N	Q	T	G	K	K	I	S	V	L	E	V	T	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A	G
Template Known Secondary structure				T	T	B									T									T	T	S	S																	T	T										T	T									T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	.	.	.	.	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.
Template Conservation
Template Sequence		R	I	G	Y	R	V	L	E	R	L	V	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	D	I	V	T	V	N	A	P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W	L
Template Known Secondary structure												G	G	G			S							S	S											T					S	S									S									S	T	T	T	T	T		B						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	.	.	.	.	.	F	T	G	H	Q	A	F	L	T	A	E	A	L
Query Conservation																																																																.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	T	A	R	G	A	I	C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	D	H	P	W	R	D	M	R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	S	G	T	T	L	D	A	Q
Template Known Secondary structure					S		G	G	G	B												T	S							S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									T	T	S								S		G	G	G	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.														.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K	G	E	.	.	.	T	C	P	N	E	L	V
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		T	R	Y	A	Q	G	T	V	N	I	L	E	S	F	F	T	G	K	F	D	Y	R	P	Q	D	I	I	L
Template Known Secondary structure																	T	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions