Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 9 Aligned Residues 305 % Identity 28% Template c2eklA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: structure of st1218 protein from sulfolobus tokodaii Resolution 1.77 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N
Query Conservation
Alig confidence							.	.																.																																											.	.
Template Conservation							.	.																.																																											.	.
Template Sequence		V	K	A	L	I	.	.	T	D	P	I	D	E	I	L	I	K	T	L	R	E	K	.	G	I	Q	V	D	Y	M	P	E	I	S	K	E	E	L	L	N	I	I	G	N	Y	D	I	I	V	V	R	S	R	T	K	V	T	K	D	V	I	E	K	G	K	.	.	K	L	K	I	I	A	R	A	G	I	G	L	D
Template Known Secondary structure							.	.		S													T	.	T							T	T										G	G	G		S						S	S	S		B									T	.	.	T								S	S			T
Template Predicted Secondary structure							.	.																.																																											.	.
Template SS confidence
		6	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		N	I	D	T	E	E	A	E	K	R	N	I	K	V	V	Y	A	P	G	A	S	T	D	S	A	V	E	L	T	I	G	L	M	I	A	A	A	R	K	M	Y	T	S	M	A	L	A	K	S	G	I	F	.	.	K	K	I	E	G	L	E	L	A	G	K	T	I	G	I	V	G	F	G	R	I	G	T	K	V	G
Template Known Secondary structure		T	B								T	T							T	T	T	T																		T										T	T			.	.									T	T							S		S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		I	I	A	N	A	M	G	M	K	V	L	A	Y	D	I	L	D	I	R	E	K	A	E	K	I	N	A	K	A	V	S	L	E	E	L	L	K	N	S	D	V	I	S	L	H	V	T	V	S	K	D	A	K	P	I	I	D	Y	P	Q	F	E	L	M	K	D	N	V	I	I	V	N	T	S	R	A	V	A	V	N
Template Known Secondary structure							T	T								S	S									T	T														S										T	T	S			S	B								S		T	T						S	S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	.	.	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N
Query Conservation																																													.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	L	L	D	Y	I	K	K	G	K	V	Y	A	Y	A	T	D	V	F	W	N	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	E	E	W	E	L	E	L	L	K	H	E	R	V	I	V	T	T	H	I	G	A	Q	T	K	E	A	Q	K	R	V	A	E	M	T	T	Q	N	L	L	N
Template Known Secondary structure											T	T								S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			S									S	T	T						S		T	T		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.														.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		318	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	G	E	T	C	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	K	E	L	G	M	I
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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