Return to main results Retrieve Phyre Job Id

Job DescriptionP52643
Confidence96.86%DateThu Jan 5 12:05:56 GMT 2012
Rank306Aligned Residues89
% Identity13%Templatec2e37B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure of tt0471 protein from thermus thermophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160........ .170........ .180.........190.........200.........210
Predicted Secondary structure 







..




............











Query SS confidence 























. .









. . . . . . . . . . . .































Query Sequence  KTAGVIGTGKIGVAMLRILKGFGM. . RLLAFDPYPS. . . . . . . . . . . . AAALELGVEYVDLPTLFSESDVISLHCPLTPE
Query Conservation    




 
 

  

  
  

 .. 
        ............            
 


  



 
  


  
Alig confidence 























..









............































Template Conservation   

 




 

   
  
       

 
 
       
 
 

                   
  








  
 
Template Sequence  XKVGIVGSGXVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVRAGSYGDLEGARAVVLAAGVARL
Template Known Secondary structure 


STT

S
SSTTGGGS




GGGGTT
S

S


Template Predicted Secondary structure 



























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   211........220... ......230...
Predicted Secondary structure 





.......




Query SS confidence 












. . . . . . .









Query Sequence  NYHLLNEAAFEQM. . . . . . . KNGVMIVNTS
Query Conservation 
  

    
  
.......
 

 


  
Alig confidence 












.......









Template Conservation       
  
       
    
   




Template Sequence  QLLDRNAQVFAQVVPRVLEAAPEAVLLVAT
Template Known Secondary structure 
TT

S
Template Predicted Secondary structure 




Template SS confidence 





























   87..90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions