Job Description P52643 Confidence 95.06% Date Thu Jan 5 12:05:56 GMT 2012 Rank 500 Aligned Residues 61 % Identity 25% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																				.											.																	.	.	.	.							.
Query SS confidence																				.											.																	.	.	.	.							.
Query Sequence		T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	.	K	G	F	G	M	R	L	L	A	F	.	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	.	.	.	.	D	L	P	T	L	F	.	S	E	S	D	V	I	S	L	H	C	P
Query Conservation																				.											.																	.	.	.	.							.
Alig confidence																				.											.																	.	.	.	.							.
Template Conservation
Template Sequence		G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P
Template Known Secondary structure									S										S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions