Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 7 Aligned Residues 310 % Identity 28% Template c2d0iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3 Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N
Query Conservation
Alig confidence																									.	.																																									.	.
Template Conservation																									.	.																																									.	.
Template Sequence		M	R	P	K	V	G	V	L	L	K	M	K	R	E	A	L	E	E	L	K	K	Y	A	.	.	D	V	E	I	I	L	Y	P	S	G	E	E	L	K	G	V	I	G	R	F	D	G	I	I	V	S	P	T	T	K	I	T	R	E	V	L	E	N	A	E	.	.	R	L	K	V	I	S	C	H	S	A	G	Y	D
Template Known Secondary structure				S						S														S	.	.							S								T	T	G	G	G		S						T	T	S		B						T	T		T	.	.	T							S	S	S			T
Template Predicted Secondary structure																									.	.																																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.
Query Sequence		N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	.	.	.	.	.	.	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K
Query Conservation																																																											.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	D	L	E	E	A	T	K	R	G	I	Y	V	T	K	V	S	G	L	L	S	E	A	V	A	E	F	T	V	G	L	I	I	N	L	M	R	K	I	H	Y	A	D	K	F	I	R	R	G	E	W	E	S	H	A	K	I	W	T	G	F	K	R	I	E	S	L	Y	G	K	K	V	G	I	L	G	M	G	A
Template Known Secondary structure		T	B								T	T																																						T	T										T	T	S						S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S
Query Conservation																											.
Alig confidence																											.																																														.
Template Conservation																																																																									.
Template Sequence		I	G	K	A	I	A	R	R	L	I	P	F	G	V	K	L	Y	Y	W	S	R	H	R	K	V	N	V	E	K	E	L	K	A	R	Y	M	D	I	D	E	L	L	E	K	S	D	I	V	I	L	A	L	P	L	T	R	D	T	Y	H	I	I	N	E	E	R	V	K	K	L	E	.	G	K	Y	L	V	N	I	G
Template Known Secondary structure											G	G	G	T								T	T																								S										T	T	T	T	T	T	B								T	T	.	T							S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	A	L	V	D	E	K	A	V	T	E	A	I	K	Q	G	K	L	K	G	Y	A	T	D	V	F	E	K	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	E	H	E	L	F	K	Y	E	W	E	T	V	L	T	P	H	Y	A	G	L	A	L	E	A	Q	E	D	V	G	F	R	A	V	E
Template Known Secondary structure			G	G	G	B											T	T		S	S					S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.		S			G	G	G	G		T	T	T						S		T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.														.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	N	L	E	K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L	K	V	L	R	G	E	V	P	E	D	L	V
Template Known Secondary structure								T	T				T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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