Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 12 Aligned Residues 306 % Identity 33% Template c2cukC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase; PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	.	.	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G
Query Conservation																																		.	.
Alig confidence							.	.													.													.	.																																		.	.
Template Conservation							.	.													.																																																.	.
Template Sequence		M	R	V	L	V	.	.	T	R	T	L	P	G	K	A	L	D	R	L	.	R	E	R	G	L	E	V	E	V	H	R	G	L	F	L	P	K	A	E	L	L	K	R	V	E	G	A	V	G	L	I	P	T	V	E	D	R	I	D	A	E	V	M	D	R	A	K	.	.	G	L	K	V	I	A	C	Y	S	V	G
Template Known Secondary structure							.	.	S	S			S	S	S	T					.			T	T								S	S												T	T		S						T	T	S		B									S	.	.	S							S	S	S
Template Predicted Secondary structure							.	.													.																																																.	.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		F	N	N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	.	.	.	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I
Query Conservation																																																										.	.	.
Alig confidence																																																										.	.	.
Template Conservation
Template Sequence		V	D	H	V	D	L	E	A	A	R	E	R	G	I	R	V	T	H	T	P	G	V	L	T	E	A	T	A	D	L	T	L	A	L	L	L	A	V	A	R	R	V	V	E	G	A	A	Y	A	R	D	G	L	W	K	A	W	H	P	E	L	L	L	G	L	D	L	Q	G	L	T	L	G	L	V	G	M	G	R	I
Template Known Secondary structure			T	T	B								T	T								S	T	T																	T	T										T	T							T	T	T	T						T	T							S		S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		G	Q	A	V	A	K	R	A	L	A	F	G	M	R	V	V	Y	H	A	R	T	P	K	P	L	.	.	.	.	P	Y	P	F	L	S	L	E	E	L	L	K	E	A	D	V	V	S	L	H	T	P	L	T	P	E	T	H	R	L	L	N	R	E	R	L	F	A	M	K	R	G	A	I	L	L	N	T	A	R	G
Template Known Secondary structure												T	T								S	S			S		.	.	.	.	S	S		B											S										T	T	T	T	T		B						T	T	S		T	T							S		G
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L
Query Conservation
Alig confidence															.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	D	T	E	A	L	V	E	A	L	R	.	G	H	L	F	G	A	G	L	D	V	T	D	P	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	G	H	P	L	Y	A	L	P	N	A	V	I	T	P	H	I	G	S	A	G	R	T	T	R	E	R	M	A	E	V	A	V	E	N	L
Template Known Secondary structure		G	G	B											.		T	S	S					S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	G	G	G	G		T	T						S		T	T
Template Predicted Secondary structure															.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.														260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	L	E	K	G	E	T	C	P	N	E	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	L	E	G	R	E	P	P	N	P	V	V
Template Known Secondary structure						T	T	S			S	S	B
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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