Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 4 Aligned Residues 307 % Identity 29% Template c1ygyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N	N
Query Conservation
Alig confidence						.	.																	.	.																																									.	.
Template Conservation						.	.																	.	.																																									.	.
Template Sequence		V	V	L	I	.	.	A	D	K	L	A	P	S	T	V	A	A	L	G	D	Q	V	.	.	E	V	R	W	V	D	G	P	D	R	D	K	L	L	A	A	V	P	E	A	D	A	L	L	V	R	S	A	T	T	V	D	A	E	V	L	A	A	A	P	.	.	K	L	K	I	V	A	R	A	G	V	G	L	D	N
Template Known Secondary structure						.	.		S	S			G	G	G	G	T	T	S		S	S	S	.	.							T	T	S								G	G	G		S						S	S	S		B							T		T	.	.	T							S	S	S			T	T
Template Predicted Secondary structure						.	.																	.	.																																									.	.
Template SS confidence
		6	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	V	D	A	A	T	A	R	G	V	L	V	V	N	A	P	T	S	N	I	H	S	A	A	E	H	A	L	A	L	L	L	A	A	S	R	Q	I	P	A	A	D	A	S	L	R	E	H	T	W	K	R	S	S	F	S	G	T	E	I	F	G	K	T	V	G	V	V	G	L	G	R	I	G	Q	L	V	A	Q
Template Known Secondary structure		B								T	T							T	T	S	S																	T	T										T	T				G	G	G							T	T									S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	.	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		R	I	A	A	F	G	A	Y	V	V	A	Y	D	P	Y	V	S	P	A	R	A	A	Q	L	G	I	E	L	L	S	L	D	D	L	L	A	R	A	D	F	I	S	V	H	L	P	K	T	P	E	T	A	G	L	I	D	K	E	A	L	A	K	T	K	P	G	V	I	I	V	N	A	A	R	G	G	L	V	D	E
Template Known Secondary structure					T	T	T								T	T	S									T														S									S	T	T	T	T	T		B						T	T	S		T	T							S		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	L	A	D	A	I	T	G	G	H	V	R	A	A	G	L	D	V	F	A	T	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	D	S	P	L	F	E	L	A	Q	V	V	V	T	P	H	L	G	A	S	T	A	E	A	Q	D	R	A	G	T	D	V	A	E	S	V	R	L	A	L	A
Template Known Secondary structure										T	S	S							S	S		S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			G	G	G	G		T	T					S	S		S	S		S																				T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.															.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		321	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	F	V	P	D	A	V
Template Known Secondary structure		T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions