Job Description P52643 Confidence 100.00% Date Thu Jan 5 12:05:56 GMT 2012 Rank 25 Aligned Residues 293 % Identity 18% Template c1qp8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N
Query Conservation
Alig confidence							.	.																	.	.								.	.	.	.	.	.	.	.	.											.	.	.												.	.
Template Conservation							.	.																	.	.								.	.	.	.	.	.	.	.	.											.	.	.												.	.
Template Sequence		X	E	L	Y	V	.	.	N	F	E	L	P	P	E	A	E	E	E	L	R	K	Y	F	.	.	K	I	V	R	G	G	D	.	.	.	.	.	.	.	.	.	L	G	N	V	E	A	A	L	V	S	.	.	.	R	I	T	A	E	E	L	A	K	X	P	.	.	R	L	K	F	I	Q	V	V	T	A	G	L	D
Template Known Secondary structure							.	.		S												T	T		.	.					S	S		.	.	.	.	.	.	.	.	.		T	T	B					B	S	.	.	.											T	.	.	T						B	S	S	S			T
Template Predicted Secondary structure							.	.																	.	.								.	.	.	.	.	.	.	.	.											.	.	.												.	.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.										.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	L	D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L
Query Conservation
Alig confidence									.																																													.
Template Conservation									.																																													.
Template Sequence		H	L	P	W	E	S	I	.	P	P	H	V	T	V	A	G	N	A	G	S	N	A	D	A	V	A	E	F	A	L	A	L	L	L	A	P	Y	K	R	I	I	Q	Y	G	E	K	X	K	R	G	D	Y	.	G	R	D	V	E	I	P	L	I	Q	G	E	K	V	A	V	L	G	L	G	E	I	G	T	R	V	G
Template Known Secondary structure		T	S			T	T	S	.		T	T	S							S	S	S																	T	T										T	T			.				S						T	T							S		S	T
Template Predicted Secondary structure									.																																													.
Template SS confidence
		63	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		K	I	L	A	A	L	G	A	Q	V	R	G	F	S	R	T	P	K	E	G	.	.	.	P	W	R	F	T	N	S	L	E	E	A	L	R	E	A	R	A	A	V	C	A	L	P	L	N	K	H	T	R	G	L	V	K	Y	Q	H	L	A	L	X	A	E	D	A	V	F	V	N	V	G	R	A	E	V	L	D	R
Template Known Secondary structure							T	T								S	S				S	.	.	.	S	S			B	S		S					T	T		S									S	T	T	T	T	T		B						T	T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H	Q	A	F	.	.	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L
Query Conservation																																																												.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	V	L	R	I	L	K	E	R	P	Q	F	I	F	A	S	D	V	W	W	G	R	N	D	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	D	A	E	F	F	S	L	P	N	V	V	A	T	P	W	V	A	G	G	Y	G	N	E	R	V	W	R	Q	X	V	X	E	A	V	R	N	L	I	T	Y
Template Known Secondary structure												T	T						S			T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.		G	G	G					T	S	T	T						S		S	S	S	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	G	G	R	P	R	N	I	A
Template Known Secondary structure			T	T	S			S		B
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions