Job Description P52643 Confidence 95.84% Date Thu Jan 5 12:05:56 GMT 2012 Rank 412 Aligned Residues 134 % Identity 16% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																												.													.	.	.																																		.	.	.	.	.
Query SS confidence																												.													.	.	.																																		.	.	.	.	.
Query Sequence		Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	R	L	L	A	F	D	P	Y	P	S	A	A	.	.	.	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	.	.	.	.	.
Query Conservation																												.													.	.	.																																		.	.	.	.	.
Alig confidence																												.													.	.	.														.																				.	.	.	.	.
Template Conservation																																																									.
Template Sequence		K	N	A	K	V	I	V	H	G	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	L	E	.	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G	G	K	E	E	M	D	L
Template Known Secondary structure		T	T	S							S	S	T	T											T	T									S													T					S			T	.	T				S						S	S	T	T		T	T	S	T	T	T	T	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		A	F	P	K	A	F	I	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	V	A	F	D	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	V	E	T	P	F	I	R	.	.	.	.	.	Y	A
Template Known Secondary structure		S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S						.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.																															.	.	.	.	210	.	.	.	.																	.	.	.	.	.	220	.	.	.						.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E	K	G	E	T	C	P	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	R	G	K	Q	T	I	S	G	A	A	V	I	V	L	Q	A	V	E	Q	F	E	L	Y	T	H	Q	R	P	S	D	E	L	I
Template Known Secondary structure				T	T																							S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions