Job Description P52643 Confidence 97.30% Date Thu Jan 5 12:05:56 GMT 2012 Rank 228 Aligned Residues 138 % Identity 9% Template c1js1Z_ PDB info PDB header:transferase Chain: Z: PDB Molecule:transcarbamylase; PDBTitle: crystal structure of a new transcarbamylase from the2 anaerobic bacterium bacteroides fragilis at 2.0 a3 resolution Resolution 2.00 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		D	A	A	K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G	V	I	G	.	.	.	.	.	T	G	K	I	G	V	A	M
Query Conservation																																																																					.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	I	Q	H	S	G	R	P	V	F	S	M	E	A	A	T	R	H	P	L	Q	S	F	A	D	L	I	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	Y	K	K	T	A	R	P	K	V	V	M	T	W	A	P	H	P	R	P	L	P	Q	A	V	P	N	S	F
Template Known Secondary structure							S	S	S					S	S		S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S											S	S				S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.												.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	.	.	.	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	.	.	.	.	.	.	.	.	.	.	.	L	L	N	E	A	A	F	E	Q	M	K	N
Query Conservation																		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																																														.
Template Sequence		A	E	W	M	N	A	T	D	Y	E	F	V	I	T	H	P	E	G	Y	E	L	D	P	K	F	V	G	N	A	R	V	E	Y	D	Q	M	K	A	F	E	G	A	D	F	I	Y	A	K	N	W	A	A	Y	T	G	D	N	Y	G	Q	I	L	S	T	D	R	N	W	T	V	G	D	R	Q	M	A	.	V	T	N
Template Known Secondary structure							T	S	S	S								T	T									T	T					S							T	T		S											S	G	G	G	T	T							T	T	S	S	B						T	.	T	S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.
		226	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		G	V	M	I	V	N	T	S	.	.	.	R	G	A	L	I	D	S	Q	A	A
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		N	A	Y	F	M	H	C	L	P	V	R	R	N	M	I	V	T	D	D	V	I
Template Known Secondary structure		S							S				B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions