Job Description P52643 Confidence 98.55% Date Thu Jan 5 12:05:56 GMT 2012 Rank 112 Aligned Residues 219 % Identity 19% Template c1edzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate dehydrogenase; PDBTitle: structure of the nad-dependent 5,10-2 methylenetetrahydrofolate dehydrogenase from saccharomyces3 cerevisiae Resolution 2.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	D	F	L	L	T	E	K	T	A	K	T	A	.	.	.	.	.	.	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	I	A	L	R	C	A	G	F	N	N	V	D	L	D	A	A
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.			.	.	.		.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.			.	.	.		.	.	.	.	.	.	.	.	.
Template Sequence		T	W	T	Q	K	T	S	E	S	M	G	F	R	Y	D	L	R	V	I	E	D	K	D	F	L	E	E	A	I	I	Q	A	N	G	D	D	S	V	N	G	I	M	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	P	.	.	.	V	.	.	.	.	.	.	.	.	.	F	G	N	A	Q	D	Q	Y	L
Template Known Secondary structure												T									S	S	G	G	G												T	T								.	.	.	.	.	.	.	.	.	.	.	.	S		.	.	.	S	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.			.	.	.		.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.													.	100				.										.	.	.	.	.	.	.	.	110
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	L	G	L	K	V	V	R	V	P	A	Y	D	P	E	A	V	A	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	E	G	L	T	G	F	T	M	Y	G	K	T	A	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	V	V	C	K	E	K	D	V	E	G	L	N	H	V	Y	Y	Q	N	L	Y	H	N	V	R	Y	L	D	K	E	N	R	L	K	S	I	L	P	C	T	P	L	A	I	V	K	I	L	E	F	L	.	.	.	.	.	.	.	.	.	K	I	Y	N	N	L	L	P	E	G	N	R	L	Y	G	K	K	C	I
Template Known Secondary structure		T	T	T	S		T	T	T	B	T	T			S									T	T			B	S	S	S	S	S		S	B																	T	.	.	.	.	.	.	.	.	.	T		S		T	T	S		T	T		T	T	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		149	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190															.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.
Predicted Secondary structure									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		V	I	G	T	G	K	I	.	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	A	L	E	L	G	V	E	Y	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	.	.	N
Query Conservation									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		V	I	N	R	S	E	I	V	G	R	P	L	A	A	L	L	A	N	D	G	A	T	V	Y	S	V	D	V	N	N	I	Q	K	F	T	R	G	E	S	L	K	L	N	K	H	H	V	E	D	L	G	E	Y	S	E	D	L	L	K	K	C	S	L	D	S	D	V	V	I	T	G	V	P	S	E	N	Y	K	F	P
Template Known Secondary structure							T	T	T										T	T	S								S	S							S				S	S																									S									T	T			B
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	L	L	N	E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	Y	I	.	.	.	.	.	.	.	.	K	E	G	A	V	C	I	N	F	A	C	T	K	N	F	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	K	E	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure		T	T	T	S	.	.	.	.	.	.	.	.		T	T							S	S	S			B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.									.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																		.	.	.	.	.	.	.																											290
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	G	H	Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	P	M	T	G	K	V	T	I	A	M	L	L	R	N	M	L	R	L	V	R	N	V	E
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions