Job Description P52643 Confidence 99.97% Date Thu Jan 5 12:05:56 GMT 2012 Rank 41 Aligned Residues 296 % Identity 16% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																															.	.	.																																										.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																										.	.	.	.	.	.	.
Query Sequence		K	L	A	V	Y	S	T	K	Q	Y	D	K	K	Y	L	Q	Q	V	N	E	S	F	G	F	E	L	E	F	F	.	.	.	D	F	L	L	T	E	K	T	A	K	T	A	N	G	C	E	A	V	C	I	F	V	N	D	D	G	S	R	P	V	L	E	E	L	K	K	H	G	V	K	Y	.	.	.	.	.	.	.
Query Conservation																															.	.	.																																										.	.	.	.	.	.	.
Alig confidence																															.	.	.																									.																	.	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		R	I	A	G	C	L	H	M	T	V	E	T	A	V	L	I	E	T	L	V	A	L	G	A	E	V	R	W	S	S	C	N	I	F	S	T	Q	D	H	A	A	A	A	I	A	K	A	G	I	P	V	F	A	W	K	G	.	E	T	D	E	E	Y	L	W	C	I	E	Q	T	L	H	F	K	D	G	P	L	N	M
Template Known Secondary structure										S													T	T								S	S	T	T	T												T	T							S	S	.												T	T	S			T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.
Predicted Secondary structure																				.	.	.	.	.													.								.	.	.	.	.	.																											.
Query SS confidence																				.	.	.	.	.													.								.	.	.	.	.	.																											.
Query Sequence		I	A	L	R	C	A	G	F	N	N	V	D	L	D	A	A	K	E	.	.	.	.	.	L	G	L	K	V	V	R	V	P	A	Y	D	.	P	E	A	V	A	E	H	.	.	.	.	.	.	A	I	G	M	M	M	T	L	N	R	R	I	H	R	A	Y	Q	R	T	R	D	A	N	F	S	L	.	E	G	L	T
Query Conservation																				.	.	.	.	.													.								.	.	.	.	.	.																											.
Alig confidence																				.	.	.	.	.													.								.	.	.	.	.	.																											.
Template Conservation
Template Sequence		I	L	D	D	G	G	D	L	T	N	L	I	H	T	K	H	P	Q	L	L	S	G	I	R	G	I	S	E	E	T	T	T	G	V	H	N	L	Y	K	M	M	A	N	G	I	L	K	V	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	S	L	I	D	G	I	K	R	A	T
Template Known Secondary structure					S	S	S									T		G	G	G	G	T	T								S													T	T				S					S	T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		G	F	T	M	Y	G	K	T	A	G	V	I	G	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	R	L	L	A	F	D	P	Y	P	S	A	A	.	.	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V	I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N
Query Conservation																																												.	.
Alig confidence																																												.	.																											.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		D	V	M	I	A	G	K	V	A	V	V	A	G	Y	G	D	V	G	K	G	C	A	Q	A	L	R	G	F	G	A	R	V	I	I	T	E	I	E	P	I	N	A	L	Q	A	A	M	E	G	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	I	F	V	T	T	T	G	.	.	.	.	C	V	D	I	I	L
Template Known Secondary structure						T	T	S								S														T								S											T	T										T	T	T		S								.	.	.	.	S	S		S	B
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	A	A	F	E	Q	M	K	N	G	V	M	I	V	N	T	S	R	G	A	L	.	I	D	S	Q	A	A	I	E	A	L	K	N	Q	K	I	G	S	L	G	M	D	V	Y	E	N	E	R	D	L	F	F	E	D	K	S	N	D	V	I	Q	D	D	V	F	R	R	L	S	A	C	H	N	V	L	F	T	G	H
Query Conservation																							.
Alig confidence																							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		G	R	H	F	E	Q	M	K	D	D	A	I	V	C	N	I	G	H	F	D	V	E	I	D	V	K	W	L	N	E	N	A	V	E	K	V	N	I	K	P	Q	V	D	R	Y	L	L	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	R	I	I	L	L	A	E	G	R	L	V	.	.	.	N
Template Known Secondary structure						T	T	S		T	T							S	S	S	S		S	B							T	T									T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							G	G	G	S	B	S	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.															.	.	.	.	.	.	.	.	340	.	.	.	.				.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	F	L	T	A	E	A	L	T	S	I	S	Q	T	T	L	Q	N	L	S	N	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	C	A	M	G	H	P	S	F	V	M	S	N	S	F	T	N	Q	V	M	A	Q	I
Template Known Secondary structure					S			S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions