Job Description P52643 Confidence 95.06% Date Thu Jan 5 12:05:56 GMT 2012 Rank 498 Aligned Residues 86 % Identity 23% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		146	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.																		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure								.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	G	V	I	G	.	T	G	K	I	G	V	A	M	L	R	I	L	K	G	F	G	M	.	.	.	.	.	.	.	R	L	L	A	F	D	P	Y	P	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	E	L	G	V	E	Y	V	D	L	P	T	L	F	S	E	S	D	V
Query Conservation								.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D	A	D	V
Template Known Secondary structure							S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		I	S	L	H	C	P	L	T	P	E	N	Y	H	L	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	F	E	Q	M	.	K	N	G	V	M	I	V	N	T	S
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence						.										.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation						.										.
Template Sequence		A	L	L	V	.	G	A	R	P	R	G	P	G	M	.	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G
Template Known Secondary structure						.							T	T		.																								S		T	T							S
Template Predicted Secondary structure						.										.
Template SS confidence
		87	.	.	90		.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions