Job Description P36929 Confidence 98.89% Date Thu Jan 5 11:53:58 GMT 2012 Rank 223 Aligned Residues 140 % Identity 19% Template d2o07a1 SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 1.89

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		A	Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	.	.	.	.	.	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q
Query Conservation																																																														.	.	.	.	.
Alig confidence																																																														.	.	.	.	.
Template Conservation
Template Sequence		M	I	A	N	L	P	L	C	S	H	P	N	P	R	K	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	V	K	H	P	S	V	E	S	V	V	Q	C	E	I	D	E	D	V	I	Q	V	S	K	K	F	L	P	G	M	A	I	G	Y	S	S	S	K	L	T	L	H	V	G	D	G	F	E	F	M	K
Template Known Secondary structure									T	T	S	S	S										T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	.	.	V	L	P	E	E	N	S	L	Q	I	K
Query Conservation																																																																					.	.
Alig confidence			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	N	Q	D	A	F	D	V	I	I	T	D	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	Y	Y	Q	L	M	K	T	A	L	K	E	D	G	V	L	C	C	Q	G	E	C	Q	W	L	H	L	D	L	I	K	E	M	R	Q
Template Known Secondary structure		T	.		S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T	T
Template Predicted Secondary structure			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162		.	.	.	.	.	.	.	170	.	.	.	.	.																														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	L	Q	R	T	A	D	A	E	L	C	E	T	G	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	C	Q	S	L	F	P	V	V	A	Y	A	Y	C	T	I	P
Template Known Secondary structure								S										T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions