Return to main results Retrieve Phyre Job Id

Job DescriptionP36929
Confidence99.38%DateThu Jan 5 11:53:58 GMT 2012
Rank116Aligned Residues132
% Identity21%Templated1xdza_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Glucose-inhibited division protein B (GidB)
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270.........280.........290.........300...... ...310..
Predicted Secondary structure 


























..





Query SS confidence 







































































. .





Query Sequence  AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY. . PSQWCG
Query Conservation 
 
    
    
  


 


 
 

  
        
 
 
    
   
     
 
        
   ..      
Alig confidence 







































































..





Template Conservation 

 
   
      







 
  

 

   
   

 

               


 
        
        
Template Sequence  SITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDV
Template Known Secondary structure  GGGGTS
GGG


SSS
TT
TT
S
T
SSS
TT
TTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   58.60.........70.........80.........90.........100.........110.........120.........130.......
 
   313......320.........330.........340.........350.........360.........370.........380.........390..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR
Query Conservation      
 

 
 



 
     
             
   
  

  
   




 







   


 

   
  
Alig confidence 













..........................






















..














Template Conservation     

 
  


  ..........................    
      




  
  

..    
       
  
Template Sequence  RESYDIVTARAVAR. . . . . . . . . . . . . . . . . . . . . . . . . . LSVLSELCLPLVKKNGLFVALKA. . AAEEELNAGKKAITT
Template Known Secondary structure  TT


S
..........................GGG
..

Template Predicted Secondary structure 






..........................






..

Template SS confidence 















































































   138.140.........150. ........160.........170.... .....180.........
 
   393.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  TA
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  LG
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 

   191.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions