Job Description P36929 Confidence 99.43% Date Thu Jan 5 11:53:58 GMT 2012 Rank 102 Aligned Residues 137 % Identity 11% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		A	Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	.	.	.	.	.	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q
Query Conservation																																																															.	.	.	.	.
Alig confidence																																																															.	.	.	.	.
Template Conservation
Template Sequence		S	K	D	E	L	T	E	I	I	G	Q	F	D	R	V	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G	L	S	N	V	V	F	V	I	A	A	A	E	S	L	P	F
Template Known Secondary structure												T	S	S							T		T	T	S											T	T								S		G	G	G	G								T	S		G	G	G	T			S	S								T	T	S			G
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F
Query Conservation
Alig confidence				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	.	K	N	I	A	D	S	I	S	I	L	F	P	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	E	Y	V	I	K	P	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	Y	F	L	S	E	Q	Y	K	A	E	L
Template Known Secondary structure		G	G	.	T	T									S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T											T																			S
Template Predicted Secondary structure				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.																		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions