Job Description P36929 Confidence 99.22% Date Thu Jan 5 11:53:58 GMT 2012 Rank 150 Aligned Residues 113 % Identity 16% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	.	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	Q	Q	F	D	R	I	L	L	D
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	A	G	Q	I	T	L	H	R	Q	D	A	W	K	L	D	T	R	E	G	Y	D	L	L	T	S	N	G
Template Known Secondary structure				T	T						T	T		T	T						T	S			T	T		T	T								S													T	T	S	T	T	G	G	G								G	G	G					S									S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	I	Y	E	P	D	D	A	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T
Template Known Secondary structure		S	G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.																					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions