Job Description P36929 Confidence 99.79% Date Thu Jan 5 11:53:58 GMT 2012 Rank 26 Aligned Residues 192 % Identity 18% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		D	A	V	R	L	E	T	P	A	P	V	H	A	L	P	G	F	E	D	G	W	V	T	V	Q	D	A	S	A	Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	.	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		H	E	F	K	I	L	R	P	R	I	V	D	Y	L	D	K	M	K	R	G	P	Q	I	V	H	P	K	D	A	A	L	I	V	A	Y	A	G	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G	R	V	V	S	Y	E	I	R	E	D	F	A	K	L
Template Known Secondary structure																		S				S															T	T			T	T									T	T	S												T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K
Query Conservation
Alig confidence																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	.	D	I	Y	E	G	I	E	E	E	N	V	D	H	V	I	L	D	L	P	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	V	E	H	A	A	K	A	L	K
Template Known Secondary structure										T		T	T	T						S	.		G	G	G						S								S	S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																												.	.	.	.	.	.	180	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.								.	.
Query SS confidence																																																			.	.	.	.								.	.
Query Sequence		T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F	L	Q	R	T	A	D	A	E	L	C	E	T	G	T	P	E	Q	P	G	K	Q	N	L	P	G	.	.	.	.	A	E	E	G	D	G	F	.	.	F	Y	A	K	L	I	K
Query Conservation																																																			.	.	.	.								.	.
Alig confidence													.	.																																					.	.	.	.								.	.
Template Conservation													.	.
Template Sequence		P	G	G	F	F	V	A	Y	T	P	C	.	.	S	N	Q	V	M	R	L	H	E	K	L	R	E	F	K	D	Y	F	M	K	P	R	T	I	N	V	L	V	F	D	Q	E	V	K	K	E	C	M	R	P	R	T	T	A	L	V	H	T	G	Y	I	T	F	A	R	R
Template Known Secondary structure											S	S	.	.														T	G	G	G	B	S																T	T						S						S								B
Template Predicted Secondary structure													.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions