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Job DescriptionP36929
Confidence100.00%DateThu Jan 5 11:53:58 GMT 2012
Rank5Aligned Residues280
% Identity24%Templatec3m4xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nol1/nop2/sun family protein; PDBTitle: structure of a ribosomal methyltransferase
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160........ .170.........180.........190.........200.........210.........220..
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Query Sequence  LHPSWLLKRLQKAYPEQWQSIVEAN. NQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPG
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Template Sequence  TLPQQFIKKYRLLLGEEASDFFSALEQGSVKKGFRWNPLKPAGLDXVQTYHSEE. . LQPAPYSNEGFLGTVNGK. . . SFL
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   7..10.........20.........30.........40.........50.........60 .........70........ .80.
 
   223......230.........240.........250.........260...... ...270.........280.........290.........300.
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Query Sequence  FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILE. VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ
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Template Sequence  HQAGYEYSQEPSAXIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQXKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   302.......310.........320.........330.........340.........350.........360.........370.........380.
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Query Sequence  GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEE
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Template Sequence  NHAPAELVPHFSGFFDRIVVDAPCSGEGXFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKXLKNKGQLIYSTCTFAPEE
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   382.......390.........400...... ...410.........420.........
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Query Sequence  NSLQIKAFLQRTADAELCETGTPEQ. . . . . . . . . . . . . . . PGKQNLPGAEEGDGFFYAKLIKK
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Template Sequence  NEEIISWLVENYP. VTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHKDQGEGHFVAKLTFH
Template Known Secondary structure  TSS.



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   242.......250.... .....260.........270.........280.........290.........300...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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