Job Description P36929 Confidence 99.04% Date Thu Jan 5 11:53:58 GMT 2012 Rank 186 Aligned Residues 146 % Identity 12% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	.	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	Q
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F	T	P	A
Template Known Secondary structure									S		G	G	G							S		G	G	G										S	T	T								S												S					T	T	T						S								T			T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	.	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F	L	Q	R	T
Query Conservation																																																														.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C	G	D	H	S	D	L	R	G	A	K	S	E	L	A	G	X	X	E	V	F
Template Known Secondary structure											S	T	T	S				G	G	G	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		394	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	E	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	V	A	V	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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