Return to main results Retrieve Phyre Job Id

Job DescriptionP36929
Confidence98.39%DateThu Jan 5 11:53:58 GMT 2012
Rank272Aligned Residues107
% Identity12%Templatec3fteA_
PDB info PDB header:transferase/rnaChain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFD
Query Conservation      
    
  


 


 
 

  
        
 
 
    
   
     
 
        
             
Alig confidence 
































.
















...






















.

Template Conservation 

        
 




 
 
 

  

     . 
 




      

 ...       
   
           .  
Template Sequence  IAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLK. KLYVIELDREMVENLKS. . . IGDERLEVINEDASKFPFCSLGK. EL
Template Known Secondary structure 


TT
S

SSTTS

S.
S
TTTGGGG
S...S

TTB

B
S
TTS

GGGT
S.SB
Template Predicted Secondary structure 















.
...












.

Template SS confidence 















































































   22.......30.........40.........50.... .....60.........70. ........80.........90.... ..
 
   318.320.........330.........340.........350.........360.........370....
Predicted Secondary structure 
























Query SS confidence 
























































Query Sequence  RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT
Query Conservation   

 
 



 
     
             
   
  

  
   




 




Alig confidence 










.........................




















Template Conservation   

 



 

.........................
 

  

         
 
 
Template Sequence  KVVGNLPYNVA. . . . . . . . . . . . . . . . . . . . . . . . . SLIIENTVYNKDCVPLAVFMV
Template Known Secondary structure 

TTT.........................TTGGG
S
Template Predicted Secondary structure 




.........................





Template SS confidence 
























































   97..100....... ..110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions