Job Description P36929 Confidence 99.70% Date Thu Jan 5 11:53:58 GMT 2012 Rank 38 Aligned Residues 153 % Identity 18% Template c3douA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase j; PDBTitle: crystal structure of methyltransferase involved in cell2 division from thermoplasma volcanicum gss1 Resolution 1.45 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P
Query Conservation
Alig confidence																										.	.																																						.
Template Conservation																										.	.																																						.
Template Sequence		R	K	G	D	A	V	I	E	I	G	S	S	P	G	G	W	T	Q	V	L	N	S	L	A	.	.	R	K	I	I	S	I	D	L	Q	E	X	E	E	I	A	G	V	R	F	I	R	C	D	I	F	K	E	T	I	F	D	D	I	D	R	A	L	.	R	E	E	G	I	E	K	V	D	D	V	V	S	D	A	X
Template Known Secondary structure			T	T							S		T	T								T	T	T		.	.	S							S	S						T	T								T	T	S	S	S										.				T		S	S
Template Predicted Secondary structure																										.	.																																						.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F	L	Q	R	T	A	D	A	E	L	C	E	T	G	T	P
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																													.	.	.																				.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.																													.	.	.																				.	.
Template Sequence		A	K	V	S	G	I	P	S	.	.	.	.	.	.	.	.	.	.	.	R	D	H	A	V	S	Y	Q	I	G	Q	R	V	X	E	I	A	V	R	Y	L	R	N	G	G	N	V	L	.	.	.	L	K	Q	F	Q	G	D	X	T	N	D	F	I	A	I	W	R	K	N	.	.	F	S	S	Y	K	I	S	K	P
Template Known Secondary structure						S				.	.	.	.	.	.	.	.	.	.	.																													.	.	.						S	T										G	G	G	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																													.	.	.																				.	.
Template SS confidence
		114	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	P	G	K	Q	N	L	P	G	A	E	E	G	D	G	F	F	Y	A	K	L	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	S	E	I	Y	I	X	F	F	G	F	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														184	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions