Job Description P36929 Confidence 99.63% Date Thu Jan 5 11:53:58 GMT 2012 Rank 54 Aligned Residues 155 % Identity 21% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		D	A	S	A	Q	G	C	M	T	W	L	A	P	Q	.	.	.	.	.	.	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																									.	.
Template Conservation																																														.	.
Template Sequence		D	P	A	S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	G	A	.	.	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D
Template Known Secondary structure																		T	T	T	T	T	T							T		T	T	S	T	T							T	T		.	.							S	B														T	T									S	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	S	Q	W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q
Query Conservation
Alig confidence							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		E	A	L	T	E	.	.	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	.	.	.	.
Template Known Secondary structure		T	T	S		T	.	.	T														T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											T	T	S				.	.	.	.
Template Predicted Secondary structure							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		291	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	F	L	Q	R	T	A	D	A	E	L	C	E	T	G	T	P	E	Q	P	G	K	Q	N	L	P	G	A	E	E	G	D	G	F	F	Y	A	K	L	I	K	K
Query Conservation
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	L	L	E	E	K	F	G	A	F	Q	T	L	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	K	V	L	F	A	E	K	R
Template Known Secondary structure		.								S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			348	.	350	.	.	.	.	.	.	.	.	.	360	.	.																		.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions