Job Description P36929 Confidence 99.20% Date Thu Jan 5 11:53:58 GMT 2012 Rank 155 Aligned Residues 135 % Identity 11% Template c3b89A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: crystal structure of rrna methylase from escherichia coli Resolution 2.60 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	A	S	A	Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W
Query Conservation
Alig confidence																																					.	.	.																																							.	.	.
Template Conservation																																					.	.	.																																							.	.	.
Template Sequence		L	A	E	L	D	T	L	Y	D	F	I	F	S	A	E	T	P	R	R	V	L	D	I	A	C	G	L	N	P	L	A	L	Y	E	R	.	.	.	G	I	A	S	V	W	G	C	D	I	H	Q	G	L	G	D	V	I	T	P	F	A	R	E	K	D	W	D	F	T	F	A	L	Q	D	V	L	C	.	.	.	A
Template Known Secondary structure		S	T	T										S	S				S						T		T	T	T						T	T	.	.	.	T		S							S	B													T	T	T										T	T	T	.	.	.	S
Template Predicted Secondary structure																																					.	.	.																																							.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F	L
Query Conservation
Alig confidence													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		P	P	A	E	A	G	D	L	A	L	I	.	.	.	.	.	.	F	K	L	L	P	L	L	E	R	E	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	X	A	L	L	Q	S	L	N	T	P	R	X	A	V	S	F	P	T	R	S	E	A	N	.	.	.	.	.	Y	A	A	W	F	E
Template Known Secondary structure						B		S					.	.	.	.	.	.		S									S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								T		B		S								S					S	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.															.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.
		391	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	T	A	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	L	P	A	E
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions