Job Description P36929 Confidence 98.73% Date Thu Jan 5 11:53:58 GMT 2012 Rank 247 Aligned Residues 169 % Identity 13% Template c2r6zA_ PDB info PDB header:transferase Chain: A: PDB Molecule:upf0341 protein in rsp 3' region; PDBTitle: crystal structure of the sam-dependent methyltransferase2 ngo1261 from neisseria gonorrhoeae, northeast structural3 genomics consortium target ngr48 Resolution 1.80 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	R	D	S	W	L	A	L	L	D	E	A	G	M	K	G	F	P	H	A	D	Y	P	D	A	V	R	L	E	T	P	A	P	V	H	A	L	P	G	F	E	D	G	W	V	T	V	Q	D	A	S	A	Q	G	C	M	T	W	L	A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		T	A	T	E	A	V	R	T	L	I	R	A	F	P	L	V	P	V	S	Q	P	P	E	Q	G	S	Y	L	L	A	E	H	D	T	V	S	L	R	L	V	G	E	K	S	N	V	I	V	D	.	.	F	T	E	L	I	A	K	A	V	N	H	T	A	H	P	T	V	W	D	A	T	A	G	L	G	R	D	S	F
Template Known Secondary structure		T										T	T	S						S	S			S	S	S							T	T							T	T		S			B				.	.									T	T	G	G	G							T	T		T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	.	.	.	.	.	.	.	.	.	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	.	.	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I
Query Conservation																																		.	.	.	.	.	.	.	.	.																				.	.
Alig confidence								.	.																									.	.	.	.	.	.	.	.	.																				.	.															.	.	.	.
Template Conservation								.	.																																																																					.	.	.	.
Template Sequence		V	L	A	S	L	G	.	.	L	T	V	T	A	F	E	Q	H	P	A	V	A	C	L	L	S	D	G	I	R	R	A	L	L	N	P	E	T	Q	D	T	A	A	R	I	N	L	H	F	G	N	A	A	E	Q	X	P	A	L	V	K	T	Q	G	K	P	D	I	V	Y	L	D	P	X	X	A	Y	.	.	.	.
Template Known Secondary structure						T	T	.	.																										S								T	T						S																	S											.	.	.	.
Template Predicted Secondary structure								.	.																																																																					.	.	.	.
Template SS confidence
		100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	F	H	R	L	V	G	E	A	Q	D	E	V	V	L	L	H	T	A	R	Q	T	.	.	A	K	K	R	V	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.						S																.	.		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
													187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions