Job Description P36929 Confidence 97.40% Date Thu Jan 5 11:53:58 GMT 2012 Rank 303 Aligned Residues 144 % Identity 13% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		A	P	Q	N	G	E	H	I	L	D	L	C	A	A	P	G	G	K	T	T	H	I	L	E	V	A	P	E	A	Q	V	V	A	V	D	I	D	.	.	.	.	.	.	E	Q	R	L	S	R	V	Y	D	N	L	K	R	L	G	M	K	A	T	V	K	Q	G	D	G	R	Y	P	S	Q	W	C	G	E	Q	Q	F
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.				.	.	.	.	.	.	.																			.	.
Template Conservation																																																.	.	.	.	.	.	.																			.	.
Template Sequence		F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	N	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	.	.	.	.	.	.	.	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	.	.	Y	K	P	S	E	I	S
Template Known Secondary structure		S											T		T	T	S							T	T	S	T	T											S	T	T	S						.	.	.	.	.	.	.			S	T	T	G	G	G						S			G	G	.	.	G	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.																			.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	.	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q	I	K	A	F	L	Q	R	T	A	D
Query Conservation																																																					.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																											.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Sequence		D	T	L	L	C	D	I	G	E	S	S	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S	L	Q	R	R	F	.	G
Template Known Secondary structure		S											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T			S							S		T	T	S															.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	C	E	T	G	T	P	E	Q	P	G	K	Q	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	L	V	R	V	P	L	S	R	N	S	N	H	E	M	Y
Template Known Secondary structure								T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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